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Protein Structure Analysis
- ProSa
 Is a powerful tool in protein structure research. ProSa supports and guides your studies aimed at the determination of a protein's native fold. It is helpful for experimental structure determinations and modeling studies.
- NQ-Flipper
 Validates and corrects asparagine and glutamine side-chain amide rotamers in protein structures solved by X-ray crystallography.
- TopDomain
The decomposition of proteins into structurally distinct units is a common tool for classification and examination of protein structures. TopDomain-Web provides an easy-to-use albeit powerful interface to a suite of techniques for the decomposition of protein structures.
Protein Structure Classification
Please be aware that we are currently upgrading our services.
- qCOPS and Fold Space Navigator
Quantitative classification of protein structures, efficient navigation through fold space and instantaneous visualization of pairwise structure similarities.
- iCOPS - Instant Classification of New Protein Structures
Instant classification of newly determined protein structures and characterization of their novelty.
- ΔCOPS - New Fold Alert
New structural information found in the weekly releases of PDB, the public repository of known protein structure.
- TopMatch-web
An effective tool for protein structure alignment and visualization of structural similarities. Comes in an HTML version and in a flash version (beta).
- QSCOP
Endows classic SCOP with quantified structural information.
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QSCOP-BLAST
Combines the BLAST sequence search engine with QSCOP to retrieve, for a given query sequence, all structural information currently available.
Sequence Analysis
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